Tuesday, March 31, 2020
Link to soil salinity research and preliminary results from soil survey of New Mexico vineyards
Click on the link below to access a recent article on research that is on-going in California. We here in New Mexico are constantly faced with soil salinity issues...the article outlines how this issue is likely to be exacerbated by climate changes.
Salt Tolerant Grape Rootstocks
Results of statewide vineyard soil survey are displayed below in these graphics. I collected the soil samples and they were analyzed at FGL Environmental Labs in Santa Paula, CA. Dr. Ciro Velasco-Cruz our visiting statistics research professor, generated the graphs using SAS software. Take a moment to survey the results and compare them to your soil in your vineyard. How does your vineyard soil compare to the averages in your region of the state? I will be writing some more on the implications of each nutrient in the coming days and weeks.
Monday, March 30, 2020
Phenology continues
March 24, 2020: budburst, E-L stage #4, Malbec at Fabian Garcia ASC experimental vineyard, Las Cruces, NM (photo credit: (Jacque Cormier) |
|
Thursday, March 26, 2020
Planting Port
Carl (forefront) and Jose (rear) dig and prepare planting holes in anticipation of planting some Touriga Nacional vines at at the NMSU Los Lunas ASC experimental vineyard.According to Wikepedia https://en.wikipedia.org/wiki/Touriga_NacionalTouriga Nacional is a variety of red wine grape, considered by many to be Portugal's finest. Despite the low yields from its small grapes, it plays a big part in the blends used for ports, and is increasingly being used for table wine in the Douro and Dão. Touriga Nacional provides structure and body to wine, with high tannins and concentrated flavors of black fruit. Jancis Robinson has compared its relationship with Touriga Francesa to the partnership between Cabernet Sauvignon and Cabernet Franc, the former providing structure, the latter filling out the bouquet. |
Always good to see an earthworm...when you are digging a hole. Not sure what role they play in terroir |
Monday, March 23, 2020
History and Genetic Diversity of Wine Grapes adapted from recent article
Here is a short synopsis of an excellent review article by Patrice This in the journal, Trends in Genetics . The article covers how modern wine grapes were developed over time and the current status of research aspects of the genomics of the grapevine.
The following is adapted and primarily sourced from the article cited below. Other references are listed at the end of the article.
Historical origins and genetic
diversity of wine grapes
Patrice This1, Thierry Lacombe1 and Mark R. Thomas2
1 INRA, UMR Diversite ́ et Ge ́ nomes des Plantes Cultive ́ es, 2 place P. Viala, 34060 Montpellier, France 2 CSIRO Plant Industry, PO Box 350, Glen Osmond, SA 5064, Australia
Patrice This1, Thierry Lacombe1 and Mark R. Thomas2
1 INRA, UMR Diversite ́ et Ge ́ nomes des Plantes Cultive ́ es, 2 place P. Viala, 34060 Montpellier, France 2 CSIRO Plant Industry, PO Box 350, Glen Osmond, SA 5064, Australia
Current status of grape genomic
resources
What is the heck is “genomics”
anyway? How is it different from “genetics”?
Genetics and genomics are
two terms that are often incorrectly used interchangeably. Genetics is
the study of single genes and their role in the way traits or conditions are
passed from one generation to the next. Genomics describes the study of all
parts of an organism's genes. This
distinction/definitions are found at: https://www.healio.com/cardiology/genetics-genomics/news/online/%7B6cdf2745-8257-40e4-ae0c-4f1fa7193d03%7D/genetics-vs-genomics
At any rate, the two terms differ. Although “back in
day”, plant breeders I knew and worked for seldom dealt with a single gene. Most
had to account and allow for the role of multiple genes when developing new
varieties. However, here we defer to the term: genomics: the study of multiple genes and their
interactions and as “study of all
parts of an organism’s genes”, in our case, we are concerned with genes of
the grapevine and its close relatives.
Historical overview
Human culture has been associated with the grapevine
since ancient times. Wine has captured humankind’s attention …devotion even,
over the centuries. The ancient’s gods, Dionysus and Bacchus were gods of wine.
The Italian cultivar, Sangiovese translated from Latin sanguis Jovis, means the
“the blood of Jupiter” (Wikipedia).
The Vitis genus within the Vitaceae family has 60 inter-fertile
species (species is a community of individuals that can interbreed with one
another, but not with members of other populations), see Figure 1. Vitis vinifera, or the ‘wine-bearer’, the
species that originated in Eurasia about 65 million years ago, is most used in today’s
worldwide wine industry.
There are about
10,000 modern grape varieties and these cultivars are hermaphroditic, which in the case of grape means they possess
perfect flowers with male and female reproductive structures and are
self-fertile. However, hermaphroditic vines also “out-cross” easily. A few varieties
dominate the wine industry: Airen, Grenache, Carignan, Merlot, Chardonnay,
Cabernet Sauvignon, Pinot Noir, Tempranillo, Aligoté, Riesling, Rkaziteli,
Sangiovese, Sauvignon Blanc, and Chenin Blanc. Grapes are classified by their
end use as: table grapes, wine grapes, juice grapes (think Welch’s, made from the
Vitis labrusca variety, Concord) or
raisins. Most known cultivars are not planted commercially and exist
only in germplasm collections, although there is some recently renewed interest
in old landraces and local cultivars.
Figure 1. Grapevine family tree with various
species of the family Vitaceae and within
the
genus Vitis or Muscadinia. Note the single European species, Vitis vinifera, “the winebearer”.
genus Vitis or Muscadinia. Note the single European species, Vitis vinifera, “the winebearer”.
When the grape was domesticated, and likely made into wine,
it was also selected for sugar production, yield, and regular production from
year to year. The wild grapevine has/had a dioecious
(Greek dis = double, oikos =house) flowering habit, meaning
functionally male or female flowers occur on different individual plants. Cultivated
types have functionally perfect flowers…the aforementioned hermaphroditic types. The grapevine’s seeds also changed and this
characteristic is important when researching the age of seeds found in
archaeological remains. The question arises…did these changes occur over a long
period of time via natural sexual crosses and human selection, or in a short
time with mutations noticed and propagated with cuttings by observant and
enterprising humans?
Wild grapes probably originated in
the Near East, with early wine production in Iran near Hajii Firuz Tepe about
7400-7000 BP (before present). Although the earliest evidence of a functioning
winery has been documented in Armenia (Barnard et al. 2010). Seeds of domesticated
grapes dated from ~8000 ago have been found in Georgia and Turkey, and in
bronze-age sites in France. From these sites, grape culture likely spread to
Egypt, Lower Mesopotamia and on to the Phoenicians, Greeks, and Romans among
others, and eventually to China and Japan. The Romans spread V. vinifera to Germany and throughout
their empire. As Roman influence faded, the Catholic church spread wine and
grape culture, and the Islamic faith spread table grape culture.
After the Renaissance, V. vinifera was carried to the new
world, and missionaries introduced it to the Americas. Cuttings were spread to
South Africa, Australia and New Zealand in the 19th century. By the
end of the 19th century, the fungal diseases: powdery mildew, downy
mildew, and black rot and the root louse phylloxera were carried to Europe from
North America and spread across the continent devasting its vineyards. Sadly,
there are few surviving native or wild grapevines in Europe today. European
viticulture was salvaged and began to thrive again when American, non-vinifera,
Vitis species were used as rootstocks
and for breeding disease resistant, inter-specific hybrids (see Table 1, from
Keller, the Science of Grapevines)
Figure 2. Wild Vitis (above) and fairly modern wine grapes (below): Muscat Blanc 9middle) and Muscat Noir (bottom).
Images from Kew Science website: http://www.plantsoftheworldonline.org/taxon/urn:lsid:ipni.org:names:325876-2
Trait
|
Eurasian Species
|
American Species
|
Fruitfulness
|
Good
|
Poor or highly variable
|
Fruit quality
|
Good
|
Poor
|
Usefulness
|
Highly diverse products
|
Niche products
|
Propagate capacity
|
Good
|
Variable
|
Lime tolerance
|
Good
|
Highly variable
|
Phylloxera tolerance
|
Poor
|
Good or variable
|
Disease tolerance
|
Poor
|
Good or variable
|
Table 1. Viticultural traits of
American and Eurasian grapevine species. Table from Keller, 2010, The Science of Grapevines
Hybrids were popular until the 1950’s,
but are scarce today because hybrids seldom have produced fruit and wine that satisfies
most European winegrowers or the hopes of the breeders themselves. As M. Keller
explains in his comprehensive textbook, The
Science of Grapevines, “the only unequivocal success story thus far has
been the grafting of phylloxera-susceptible European wine grape cultivars to
rootstocks that are usually hybrids of tolerant American Vitis species”.
From
the wild grapevine to varieties
Wild European
grapevines provide clues to the origin of modern cultivars. The question is:
are they true-to-type wild vines, i.e. Vitis
silvestris types, or simply escapes from vineyards or out-crossed hybrids
between wild and cultivated types. Modern genetic techniques such as DNA
analysis can help determine whether the collected individual vines are truly
wild or whether they possess some genetic contribution from cultivated types.
Wild ancestors and modern varieties differ in: sugar content, flower sex, berry
and bunch size.
Early
domestication and propagation by seed
Early on,
grapes were spread and distributed by seed. Seedling plants result from sexual
crosses with new combinations of genes that could then be spread by cuttings
(vegetative propagation) when desirable traits occurred. Patrice This and her
co-authors, in the source article: Historical origins and genetic
diversity of wine grapes, reminds us
that the Pinot and Gouais varieties produced progeny maintained and adapted to
the environment in northeast France and exist to this day. But they go on to
explain that it is unlikely that there is gene mixing between wild and
cultivated types, as the flowering times of the two are not the same.
Was
there a single domestication event or many domestication events?
Was there more
than one genetic pool that generated modern varieties? The Muscat group of
varieties, with their distinct flavors and aromas, support the likelihood of
multiple genetic sources. Some researchers maintain a difference between
European and Near Eastern grapes. For example, Chardonnay, considered a French variety
from a cross of Pinot and Gouais of Croatian origin, demonstrates a mix of
genes from different regions. Syrah, another example, long thought to be of
eastern origin, has been determined to be of French origin.
How
old are modern grape varieties?
Speculation
about the historical origins of current cultivars is common in popular
publications but no evidence supports the notion that varieties from antiquity
or the middle ages exist today, although the analysis of ancient DNA has been
much improved lately. For instance, grape seeds from between 2600 and 1700
years ago have been successfully analyzed. Seeds are important as they can be a
result of crosses, and coupled with the analysis of ancient wood, can
characterize the identity of old cultivars and provide comparison with modern
cultivars. The old variety, Mission, that is believed to be the first grape of
European origin grown in New Mexico was brought to the Americas by the Spanish
missionaries as seeds. It is believed that the Mission variety found in South
America in the 16th century was vegetatively propagated and
transported as cuttings to various American countries where it was renamed with
local names such as: Païs, Criolla chica, Rosa del Peru, and Negra corriente. Vegetative
propagation of grapevines to plant new vineyards and move vines from region to
region has been common for many hundreds of years. However, despite the
importance of vegetative propagation, recent genetic characterization of
cultivars has shown mutations frequently have had a role in generating genetic
diversity.
The
role of mutations
Figure 3. Pinot Noir with somatic
mutation evident on individual berries
Sexual
crossing and natural mutations have driven grapevine evolution. The appearance
of hermaphrodite flowers, the most important genetic development, seems to be
the result of a mutation. It is not known when this trait was found and first
used by humans. However, it is assumed that the adoption of such uniformly
flowering and fruiting plants was rapid. Another mutation, berry skin color,
was quickly made use of in development of modern cultivars. Because wild grapes
are believed to have had black berries, white berries were probably selected
and maintained during domestication.
Somatic
mutations that do not originate from sexual gene mixing but from vegetative
tissue, can be stably maintained and vegetatively propagated over time. The
Pinot family is notorious for many vegetative and floral mutants. Pinot noir has
a black berry, Pinot gris a grey berry, and Pinot blanc has a white berry, all likely
from a mutation.
The
seedless trait in Thompson Seedless, Emperor Seedless and Chasselas apyrène all
probably occurred separately. Humans selected this seedless trait for their
table grapes.
Vitis
vinifera germplasm and genetic diversity
Molecular
geneticists tell us that sexual and asexual multiplication and mutations have
helped expand and diversify the grapevine. As mentioned earlier, the number of
varieties in various germplasm collections around the world is likely ~10,000.
Nearly every wine growing country has its own grapevine germplasm collection that
maintains quarantines and the material in the field as living plants. Many variety
names are applied to the same cultivar as explained with the example, Mission.
But often it works the other way around, and the same name can be applied to
different cultivars, adding to the confusion. This is where microsatelitte (a bit
of the DNA strand that repeats itself, https://en.wikipedia.org/wiki/Microsatellite)
marker
studies, available since the 1990s, are very useful and effective in
identifying and differentiating varieties and determining the true extent of
genetic diversity. With new genetic tools, it is estimated that the number of
vinifera varieties will prove to be closer to 5,000 than it is to 10,000 (This
et al., 2006)
This et al.
(2006) also point out that collections around the world need to cross correlate
all their information to accurately identify cultivars. This burgeoning effort
is available at http://www.montpellier.inra.fr/vassal.
Additional data and coding are being accomplished and will assist in the
development of an international database that will aid estimation of diversity
in Vitis and V. vinifera: http://www.genres.de/eccdb/vitis.
Somatic
mutations and vegetative propagation have increased the genetic diversity in
grapevine. The use of mutations in genomic studies will help assign roles to
specific genes. Identifying and maintaining these mutants is crucial and the
collection at Vassal, France has been doing this for many years and has cataloged
over 200 mutants (This et al. 2006).
Conclusion
Various
collections can be defunded, and varieties can be lost. DNA profiling and a
common database are needed to determine the true number of varieties, their
relationships, genetic diversity and identification of unique individuals. Such
data is also helpful for historical investigation of domestication.
Wild
grapevines are poorly characterized, and extensive analysis of wild individuals
from a broad geographical area are crucial to understand the role of Vitis silvestris in the domestication
process. Recent DNA studies and application of genomic techniques has increased
characterization of the genes and genetic control of important traits. This detailed
genetic analysis should help us understand the biology of the grape, and if
properly and thoughtfully utilized in the field, can improve viticulture around
the world.
References
Barnard,
H., Dooley, A. N., Areshian, G., Gasparyan, B., and K.F. Faull. 2010. Chemical
evidence for wine production around 4000 BCE in the Late Chalcolithic Near Eastern
highlands. Journal of Archaeological Science. 1-8. http://www.elsevier.com/locate/jas
Keller,
M. 2010. In the Science of
Grapevines: Elsevier Inc., London, UK.
This, P.,
Lacombe, T., and M.R. Thomas. 2006. Historical origins and genetic diversity of
wine grapes. Trends in Genetics. Vol 22. 9:511-519. https://www.sciencedirect.com
Preparing for table grapes
Malbec on the move at Las Cruces..photo taken last week (photo credit: Ms. Jacque Cormier) |
On Monday March 16th Jacque Cormier and Daniel Goodrich manually dug out all
the PVC sprinkler heads, and the next day used a hand cranked ratchet to rip out the trellis
anchors. Apparently the sprinklers had to be removed
by hand because if he used the tractor ripper it would splinter them and
has in the past popped the liquid filled tires.
Apparently the vines were put in in the 90’s and the anchors looked like
they were averaging about 14 inches of concrete about 6 inches below
the soil surface. Even after all that time they were pretty solid. The vines themselves were no longer
in great shape many of them were desiccated and some showed trunk rot
when cut in half where the cordons met at the head.
Friday, March 20, 2020
Practical viticulture take three: spring weed control
These Jonquils in front of the Los Lunas ASC have escaped the winter and other threats...to successfully bring in spring...the first official day of spring this year was yesterday, March 19, 2020 |
label information for Forfeit 280 herbicide
Thursday, March 19, 2020
Practical Viticulture Take Two..correctly tying the vines to the trellis
Another option to properly secure canes is this wire twist tie, similar to that found on bread wrappers. the device and various grades of tying material used with it are pictured below...some are designed to bio degrade readily and others will last longer. The pictured tying material does not biodegrade very readily and one must be careful when applying it as they will be in place for an extended period. Go to the following link to check out some more tips on tying vines properly Michigan State vine tying tips |
Tuesday, March 17, 2020
Practical Viticulture...and another small 'illogical' take on vineyard cover crops
March 17, 2020 in the vineyard at Los Lunas ASC |
A wire tie that has been left on too long and appears to have girdled this cane |
The same cane from the photo above... with the tie removed... |
Friday, March 13, 2020
Unusual is the usual in New Mexico, and... it looks like spring!..
Unusual flowering habit for a grapevine!...old yucca flower structure and old grapevines near Engle, NM appear somewhat 'sympatico'. |
Monday, March 9, 2020
Time for bud break? and How a Bud Becomes a Bunch
What is going on with this bud? Notice anything significant? This photograph was taken today by NMSU Viticulture graduate student Ms. Jacqueline Cormier. |
Of Buds and Bunches
Adapted from: “What causes a bud to produce a bunch… or
not?” by Devin Carroll, Advanced
Agricultural Services, Inc. Hanford, CA., Practical Winery and Vineyard,
Nov-Dec. 2009.
This short piece, adapted from the
more detailed article cited above covers some vine processes and factors that
affect bud formation and fruitfulness. The original article also covers the
phenomenon of plant mediated bunch necrosis or PMBN. We will not cover that
here.
Fruitfulness depends on the percentage
of buds on a grapevine that produce flower clusters. Flower initiation,
formation, bloom and fruit set, fruit development and ripening require a two-year
cycle. The developing buds contain tissues that form primordial flower clusters
and require a favorable environment to flower and fruit. There are several
steps to achieve a desired level of fruitfulness: flower initiation and minimal
bud necrosis. Bud necrosis is caused when the vine “decides” that to carry the
bud to fruitfulness is not worth the metabolic costs. It takes more energy than
the vine can afford and the bud is aborted. In this case, secondary buds within
the compound bud will grow and allow the vine to survive but not bear fruit, or
bear much less fruit. Injury to the vine can also cause bud necrosis…pathogens,
heat, water stress or frost can damage or kill a bud. Bud mites, can infest
buds and move from old to new buds during the early weeks after bud break and
multiply from there. Hundreds of these mites can inhabit one bud and damage the
inflorescence (flower cluster).
Inflorescence
initiation
Grape flowers and fruit clusters
are borne on new shoots that come from dormant buds. Each dormant bud is formed at each node and leaf
axil on a shoot the previous season and is actually a compound bud that contains three separate buds. The primary bud
within the compound bud, for most Vitis
vinifera varieties, under most growing conditions, will produce 1 to 3
clusters with 2 clusters being typical. However, this shoot may remain
vegetative on young vines and the number of inflorescences is also variety
dependent. For instance, Chambourcin (a hybrid) and Petit Verdot (Vitis vinifera) often have more than two
clusters per shoot. The secondary bud can have a fruit cluster but not always, and
the third bud typically produces vegetative growth (shoots and leaves) only.
Regardless of flower clusters, each simple bud contains a 6-12 node shoot that
is compressed and complete with primordial leaves, flower clusters (if present)
and tendrils. This complete shoot is within each bud. Compound buds develop
from the base of the shoot towards to the shoot tip. This process takes from
two to three months beginning as soon as the node appears in the spring. After
formation, the bud stops growing and becomes dormant until it breaks and grows the
following spring. Grapevines do not form terminal buds as many temperate zone
fruit crops do. The shoot tip will die back in the winter to a fully ripened
(lignified) portion of the shoot that has a mature dormant bud. Cluster
initiation for next year begins in midsummer and are fully formed within the dormant
bud by the end of the growing season. Final development of the flowers occurs
as the shoot emerges the following spring. The flowers are fully formed by
bloom time when the shoots are about 18-24 inches long. Grapes generally flower
late… about 4 to 5 weeks after bud break, later than most tree fruit crops.
Grapes are wind pollinated for the most part and warm, sunny conditions at
bloom favor fruit set. Note that the most fruitful buds are located at bud
number 4 to 10 on the cane. Thus, when spur pruning (leaving only the number 1
to 4 buds) some degree of fruitfulness or total possible crop is sacrificed. If
spur pruning, the buds left on spurs are formed before bloom. These represent
next year’s entire crop. If canes are used, some crop will come from buds
closer to the shoot tip, and they are exposed to environmental conditions that
existed later than the buds near the base of the shoot.
It is possible for two buds to form
at the same node. This phenomenon is common in Pinot Noir, and has been
observed in Cabernet Sauvignon, Syrah, Merlot and Chardonnay. Because these are
fairly widely planted varieties, this double bud phenomenon may be due to more
reporting, rather than actually something more common to these varieties in
particular.
The rachis (specialized stem bearing
flowers and fruit) forms branches before the bud goes dormant, but the flowers
themselves are formed after winter, at bud break. Therefore, environmental
conditions just after bud break influence the final number of flowers. But
cluster size contingent on rachis branching is determined by conditions in the prior year.
A non-specific tissue called an
“anlage” gives rise to either an inflorescence (flower cluster) or a tendril.
The inflorescence can be seen within a bud ten nodes from the shoot tip when
the bud is dissected and viewed with a microscope. The vine’s decision to form
flower clusters comes much earlier and is correlated with temperature
especially in the buds about three nodes from the shoot tip. Therefore, both
vine physiology and temperatures the shoot is exposed to in the first weeks
following bud break play a role in vine fruitfulness.
Several factors impact flower
cluster formation: temperature (hot and cold), light and shading, carbohydrate
reserves, water, nitrogen, mineral deficiencies, and plant growth hormones.
Temperatures held at 68oF immediately following bud
break on Muscat grapes greatly reduced the number of flower clusters.
Similarly, at temperatures > 95o F, flower cluster numbers were
greatly reduced. However, cold temperatures are likely the most common cause
for low fruitfulness in a given variety the following year because temperatures
in that range are more common in the spring.
Solar radiation (light) and favorable temperature are two critical
climatic factors. Shade can reduce fruitfulness, but shading due to canopy is
not the usual case early in the season when leaves are small or not yet
emerged. Thus, cloudy, cool days as the shoot emerges and grows in spring can
reduce bud fruitfulness. The amount of light falling on a shoot’s leaves is
correlated to the number of flower clusters eventually formed in the buds of
that shoot. Accumulated light rather than just peak intensity is the important
aspect. A short day-length or several hours or days of cloudiness can reduce bud
fruitfulness.
Stored carbohydrates influence the formation of flower clusters in young
buds. Carbohydrates in roots, trunk cordons, canes and spurs were stored the
year before the buds were differentiated. Thus, growing conditions and vine
strength two years ago strongly influence the current year’s fruitfulness.
Overall, buds are a weak sink for carbohydrates compared to actively growing
shoot tips. Rapid shoot growth will draw carbohydrates from the buds and
shading on such vigorously growing vines also reduces fruitfulness.
Excess water will reduce the number of flower clusters on a
vine…while water deficit does not. Overwatering and excess growth that promotes
canopy shading likely draws carbohydrates away from buds and lowers their
fruitfulness.
Mineral deficiencies that include potassium and phosphorus can
reduce bud fruitfulness. Low phosphorous detected around the time of bud break
can be linked to cold soil temperatures that prevents uptake by roots despite the
mineral being present in the soil. In the case of most New Mexico soils with
elevated pH (above 7), phosphorous can be in short supply due to reduced
availability. Potassium and phosphorus can be added to the vine via foliar
sprays. This should be done shortly after bud break to increase fruitfulness in
the first several buds.
Plant growth regulator compounds or hormones,
gibberellic acid (GA) and cytokinins interact to regulate inflorescences in
grapevines. Early on, GA can favor analage formation that give rise to
inflorescences, but that same GA decreases inflorescences by favoring tendril
formation. Cytokinins, on the other hand can favor inflorescences over
tendrils. Although some kelp-based sprays have been reported to contain
cytokinins…it is not clear if such cytokinins are the correct types for grapes.
Subscribe to:
Posts (Atom)